CDS
| Accession Number | TCMCG015C14670 |
| gbkey | CDS |
| Protein Id | XP_027112191.1 |
| Location | complement(join(14538376..14539085,14539256..14539385,14539469..14539637,14540678..14540748,14540876..14541089,14541187..14541700,14542656..14542770,14543533..14543587,14543669..14543751,14543949..14543999,14544967..14545106,14546104..14546237,14546907..14547003,14547080..14547178,14547310..14547440,14547649..14547685,14547844..14547904,14548006..14548107)) |
| Gene | LOC113731241 |
| GeneID | 113731241 |
| Organism | Coffea arabica |
Protein
| Length | 970aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027256390.1 |
| Definition | RNA-binding protein 28 isoform X1 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGAAAGAAGAAGAAGGTGAAGGCAACTGATGGCGACAGCCAATACAGCCCTTCCACCGTCTTCGTCACCGGCTTGCCCTATTCTTTGACTAATGCTCAGTTAGAAGAGAGCTTTAGTGAAGTTGGACCAATAAGACGCTGCTTTATGGTTACGAAGAAGGGGTCTAGTGAGCACCGGGGCTTTGGCTTTGTTCAATTCGCTGCAGTTGAACATGCTAATCGTGCTATTGAGCTGAAAAATGGGTCCACTGTTGGGGGTAGAAAGATTCAAGTTAAGCATGCTATGCATCGTGCTTCTCTGGAACAACGCCGATCGAAAGGAAATCAAGCAGAAATTTCTGATGGTGTTGCCCAGGCAAAAGATAACAAGTTAAGTTTGTCTGCCAAGACAGTCGAGCACGAGGAGTTTTCAAAATCTCTATCAACAGTGAATGAAACACTTGAGTCCTTGGAGAAAAGAAAAGCAGCTACAACTTCTAGCAGTATAGCTGATGAAGAAACTTCTTTAGAAAAAGAAAAGCAGAGAGTTGCAAAGACAGTCATATTTGGTGGTCTTCTTAATACTGCTATGGCAGAAGATGTTCACCGTCTTGCCAGAGAGTGTGGCACAGTACGTTCTATTATTTATCCTCTCCCCAAAGAGGAGCTTGAGCATCATGGTCTAGCTCGAGATGGATGTAAAATGGATGCTTCATCTGTCCTTTATACAAGTGTTAAATCAGCTCGTTCCTCTGTTGCAGCATTACACCAAAAAAAGATACATGGTGAACTTCTATGGGCACGTCAGCTTGGTGGAGAGGGCTCGAAGACCCAAAAGTGGAAGCTTATAGTGCGGAATCTCCCATTCAAGGCAACAGTGAATGAGATAAAGAACATGTTTTCGGCTGTGGCTTTCGTGTGGGACGTTTTTATTCCTCAAAATCCTGAGACAGGGTTGTCGAAGGGATTTGCTTTTGTTAAATTCACATCAAAGCAGGATGCAGAAAATATTATCAAGATGTTCAATGGGAAAAATTTTGGTAAAAGACCAATAGCTGTTGATTGGGCTGTTTCGAAAAAAGTTTATGCCTCCGGTGGTAAATCTCTTGATGCTGGTGAAGAAGGGCCGGACAAACATGGTGAGGAAAGTGATAGTGATGGTGATTTGGATGAGGATGATACAGAAGTCAATGAGAAATCCCTACAAGATTACAAAGTTGATGGTATGTCAGATGGGTCTGATTCAACTGAAGAGAAGGTCTCTGGCAGTGAAACAAACTTCGATGAAGAAGCAGATATTACAAGAAAAGTTCTCCAGAACCTAATTTCATCGCCGTCTAAAGCGACAGATAGCTTGGATAATGATAACTCTGGGCTGTCCAAAGAAATGAAGGATGATGAAAGTTTGGGCATATCAAGCAAATTGTCTGATACTTTTATTGCACCAAACACAATACCAGGAAATTCTGGGAAAAACAAACAAATAGAGAAAAACCCAACTGAGAGGGACAATGAACTGCAAAGGACAATATTCATTAGCAACCTTCCTTTTGATTCCAGTAGCGAAGAAGTAAAACAACGGCTCTTGGCATTTGGTGAAGTAGAATCCTTTCTTCCAGTTCTTCATCATGTTACCAAGCGACCGAGGGGAACAGGATTTCTCAAATTTAAAACATCAGATGGTGCTGATGCTGCAGTTTCAGCTGCCAATGCTGCTGCTGGTTTGGGTATCTTTCTAAAGGGTAGGCAATTAAAAATTTTGAAGGCTCTGGACAAGAAGGCAGCTCAAGATAAGGTTTCGGAGAAGACCAAAAAAGAGGATCGTGACCACCGCAATCTTTACCTGGCAAAGGAAGGTCTTATCCTCGAGGGAACTCCAGCTGCTGAAGGTGTTTCAGTGAGCGATATGTCAAAGCGCAAAATGTTGCAGGAGAAAAAAATGACTAAACTTAAATCTCCAAACTTCCATGTGTCAAGGACAAGGCTGGCGATGTACAATTTGCCAAAGACAATGTCTGAGGAAGAGTTGAAGCAACTCTGCATACATGCAGTAACTTCTCGAGCTACTAAGCAAAAGCCTGTTATTCGACAGATAAAAATTTTGAGGGAGTCCAAGAATACAAACTCAACCAGAAAAAATAGTTCTCGTGGAGTGGGTTTTGTCGAGTTTTCGGAGCATCAACATGCACTTGTGGCTTTGAGAGTTCTTAACAATAATCCAGAAACTTTTGGTCCTGAGCAACGCCCAATTGTCGAGTTTGCTGTTGATAATGTCCTAACACTGCGAAGCAGGAAAGACAAACTTCAAGCTCGGCAGCAGGATTCCTTGAATGGCGTTCAAGATTTGCAGCAGAATGACAAATCAAGTGCATTGGATTATCATTCAAAAGAGAAATCAAGAAAACGCAAATCTAGACATGATGCTAAAGCATCAGACACTTCTGGGAGTAAGACAGAAGCTGAAGTTGGGAGGCAAGTTTTTGCAGAATCTCCTTCAGGGGAAGTTCGAGTTGTTAAGAAGCAAAAAGGTGATGCTGGTGGCAAAAGGGACAACATTTCATTCAAGAAAAAGATGAGAAGCTCAAAAAATAAGCAAATACCCGACCAGGAACAAAGAAACCCTGATGGAGGCGTGCCACATCCAGCTGAAGGCACAACCATTAGTGCTCATAAGCGTGGACATCAGGAAAGAGCACAGTTATATACCAAAAAGAGGAGGCTTCAGAATCAAGCACAAAAACACGAGGAACCCGTTGGTCCTGAGATAAGAAAAAAGAGTAAAAGGAACAGTGACCCTCTGGGACGGGATGTGGTGGATAAACTTGACACACTAATTGAGCAGTACAGATCCAAATTTGCACGGCGCGATGCGGACCAAACTGACCATGAAAAGCGAGGTTCCAAACAGATCAGGAGGTGGTTCCAATCGTGA |
| Protein: MGKKKKVKATDGDSQYSPSTVFVTGLPYSLTNAQLEESFSEVGPIRRCFMVTKKGSSEHRGFGFVQFAAVEHANRAIELKNGSTVGGRKIQVKHAMHRASLEQRRSKGNQAEISDGVAQAKDNKLSLSAKTVEHEEFSKSLSTVNETLESLEKRKAATTSSSIADEETSLEKEKQRVAKTVIFGGLLNTAMAEDVHRLARECGTVRSIIYPLPKEELEHHGLARDGCKMDASSVLYTSVKSARSSVAALHQKKIHGELLWARQLGGEGSKTQKWKLIVRNLPFKATVNEIKNMFSAVAFVWDVFIPQNPETGLSKGFAFVKFTSKQDAENIIKMFNGKNFGKRPIAVDWAVSKKVYASGGKSLDAGEEGPDKHGEESDSDGDLDEDDTEVNEKSLQDYKVDGMSDGSDSTEEKVSGSETNFDEEADITRKVLQNLISSPSKATDSLDNDNSGLSKEMKDDESLGISSKLSDTFIAPNTIPGNSGKNKQIEKNPTERDNELQRTIFISNLPFDSSSEEVKQRLLAFGEVESFLPVLHHVTKRPRGTGFLKFKTSDGADAAVSAANAAAGLGIFLKGRQLKILKALDKKAAQDKVSEKTKKEDRDHRNLYLAKEGLILEGTPAAEGVSVSDMSKRKMLQEKKMTKLKSPNFHVSRTRLAMYNLPKTMSEEELKQLCIHAVTSRATKQKPVIRQIKILRESKNTNSTRKNSSRGVGFVEFSEHQHALVALRVLNNNPETFGPEQRPIVEFAVDNVLTLRSRKDKLQARQQDSLNGVQDLQQNDKSSALDYHSKEKSRKRKSRHDAKASDTSGSKTEAEVGRQVFAESPSGEVRVVKKQKGDAGGKRDNISFKKKMRSSKNKQIPDQEQRNPDGGVPHPAEGTTISAHKRGHQERAQLYTKKRRLQNQAQKHEEPVGPEIRKKSKRNSDPLGRDVVDKLDTLIEQYRSKFARRDADQTDHEKRGSKQIRRWFQS |